8849 U-box superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8849 chr_11a U-box superfamily 686353 687443 + U-box superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445404 Thaps8849.1, Thaps8849.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0418

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0273
 0.40

Most Highly Correlated Transcripts

bd737

(bd737) NA
0.9471

bd1801

(bd1801) NA
0.9204

bd738

(bd738) NA
0.9178

bd690

(bd690) NA
0.8952

23147

PUB
0.8886

23630

UEV superfamily
0.8865

bd1813

(bd1813) NA
0.8832

10422

hypothetical protein
0.8778

25415

LRR_5
0.871

9255

hypothetical protein
0.8651

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
U-box superfamily U-box domain; This domain is related to the Ring finger pfam00097 but lacks the zinc binding... - 78.5496 2.79E-17 1 - 321 superfamily 266741

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_38878 PHATRDRAFT_38878 237872 194977 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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