bd1319 (bd1319) ycf16
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd1319 bd_26x41 (bd1319) ycf16 52442 53197 - ycf16

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0069

Most Highly Correlated Transcripts

ThpsCp011

(ycf16) sulfate ABC transporter protein
1

bd1360

(bd1360) ycf24
0.9804

ThpsCp010

(ycf24) putative ABC transporter
0.9804

ThpsCp083

(ycf46) Ycf46
0.9598

ThpsCp133

(ycf46) Ycf46
0.9598

bd1720

(bd1720) ftsH
0.9505

ThpsCp046

(ftsH) cell division protein
0.9505

ThpsCp023

(ycf42) putative peroxiredoxin ycf42
0.9382

ThpsCt011

(trnY(gua))
0.9362

bd1013

(bd1013) PRX_Typ2cys
0.9085

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component; Biosynthesis of iron... cl17201 319.858 1.05E-110 8 - 247 specific 213184
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 319.858 1.05E-110 8 - 247 superfamily 266551
ycf16 sulfate ABC transporter protein; Validated - 506.102 0 1 - 251 multi-dom 214372

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 443440 Cre07.g339700.t1.2 AT3G10670.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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