ThpsCp083 (ycf46) Ycf46Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCp083	chloroplast	(ycf46) Ycf46	77298	78791	+	Ycf46

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524889	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0069

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0052	0.43	12000 16

Most Highly Correlated Transcripts

ThpsCp133 (ycf46) Ycf46 0.9606	bd1319 (bd1319) ycf16 0.9598	bd1360 (bd1360) ycf24 0.9592	bd466 (bd466) cytochrome_b_C 0.9555	bd1720 (bd1720) ftsH 0.9383	bd1304 (bd1304) Ycf4 0.9373
bd2088 (bd2088) rbcL 0.9255	bd1403 (bd1403) NA 0.923	bd467 (bd467) Cytochrome_b_N 0.9216	bd1318 (bd1318) atpF 0.9144

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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