ThpsCt011 (trnY(gua)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt011	chloroplast	(trnY(gua))	50570	50651	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524781	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0110

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0063	0.47	47 0.059

Most Highly Correlated Transcripts

bd1319 (bd1319) ycf16 0.9362	bd466 (bd466) cytochrome_b_C 0.9314	bd1441 (bd1441) ccsA 0.9291	bd1720 (bd1720) ftsH 0.9227	bd1287 (bd1287) PRK09281 0.9211	bd1013 (bd1013) PRX_Typ2cys 0.9206
bd1313 (bd1313) psbH 0.9188	bd1339 (bd1339) psaD 0.9149	bd1243 (bd1243) rpl33 0.9026	bd1350 (bd1350) psaF 0.9009

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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