bd196 (bd196) Snf7 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd196 bd_10x65 (bd196) Snf7 superfamily 5324 5860 - Snf7 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0224

Most Highly Correlated Transcripts

35682

Prefoldin superfamily
0.9094

36539

hypothetical protein
0.8841

9953

hypothetical protein
0.8783

25124

hypothetical protein
0.8692

bd381

(bd381) NA
0.8599

23218

CwfJ_C_1 superfamily
0.8408

37137

HTH_XRE
0.8392

38231

(PETC2) PRK13474
0.838

8033

hypothetical protein
0.83

268412

RluA
0.8278

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Snf7 superfamily Snf7; This family of proteins are involved in protein sorting and transport from the endosome to... - 74.583 3.09E-17 3 - 168 superfamily 267743

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_6433 PHATRDRAFT_6433 211588 178163 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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