35682 Prefoldin superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35682 chr_7 Prefoldin superfamily 474568 475086 + Prefoldin superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446219 Thaps35682.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0224

Most Highly Correlated Transcripts

bd196

(bd196) Snf7 superfamily
0.9094

267979

HCO3_cotransp superfamily
0.9044

270004

hypothetical protein
0.9022

22276

Gar1
0.8983

34357

Fcf2
0.8972

4517

hypothetical protein
0.8968

19158

GRX_PICOT_like
0.8845

268179

DTW superfamily
0.8845

20712

hypothetical protein
0.8835

42652

DRG
0.8834

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Prefoldin superfamily Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that... - 76.1143 4.02E-18 19 - 149 superfamily 263721

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11402 PHATRDRAFT_11402 212294 178707 217412 Cre12.g523150.t1.2 AT5G23290.1 286719

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 GO:0006457 GO:0016272 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0016272

prefoldin complex

Details: 
A multisubunit chaperone that is capable of delivering unfolded proteins to cytosolic chaperonin, which it acts as a cofactor for. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits. In Saccharomyces cerevisiae, it also acts in the nucleus to regulate the rate of elongation by RNA polymerase II via a direct effect on histone dynamics.
GO Category: 
CC

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