bd218 (bd218) Chloroa_b-bind superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd218	bd_8x51	(bd218) Chloroa_b-bind superfamily	33276	33848	+	Chloroa_b-bind superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0058

Most Highly Correlated Transcripts

38667 (Lhcf4) PLN00120 0.9983	33131 Chloroa_b-bind 0.9967	3816 (Lhcr7) fucoxanthin chl a/c light-harvesting protein 0.9967	38122 Chloroa_b-bind superfamily 0.9958	36081 Chloroa_b-bind 0.9954	34276 Chloroa_b-bind 0.9943
2342 (Lhcr11) fucoxanthin chlorophyll a/c light-harvesting protein 0.994	31749 Chloroa_b-bind superfamily 0.994	11501 (FCP3) Chloroa_b-bind 0.9938	2845 Chloroa_b-bind superfamily 0.9937

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Chloroa_b-bind superfamily		Chlorophyll A-B binding protein; Chlorophyll A-B binding protein.	-	218.784	1.40E-72	1 - 145	superfamily	261492

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_14442	PHATRDRAFT_14442	269925	187142	Not available	Not available	AT5G54270.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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