14106 LrgB superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
14106 chr_7 LrgB superfamily 1072352 1073908 - LrgB superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444148 Thaps14106.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0059

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0133
 0.40

Most Highly Correlated Transcripts

bd1652

(bd1652) ABC_ATPase superfamily
0.9306

bd208

(bd208) DUF3529
0.9176

bd1380

(bd1380) ycf39
0.914

bd1403

(bd1403) NA
0.8976

bd1645

(bd1645) tpt
0.8922

bd1306

(bd1306) NA
0.8886

bd1350

(bd1350) psaF
0.8875

bd1387

(bd1387) psbE
0.8867

bd1857

(bd1857) DnaJ
0.8864

bd1304

(bd1304) Ycf4
0.874

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LrgB superfamily LrgB-like family; The two products of the lrgAB operon are potential membrane proteins, and LrgA... - 107.61 6.64E-27 336 - 497 superfamily 260518

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12346 PHATRDRAFT_12346 238238 258664 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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