14389 (HDC) PLN03032
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
14389 chr_9 (HDC) PLN03032 506732 508731 + PLN03032

Synonyms

NCBI ID Ensembl Genomes exon ID
7443541 Thaps14389.1, Thaps14389.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0052

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0066
 0.42

Most Highly Correlated Transcripts

bd846

(bd846) NA
0.8534

bd1267

(bd1267) rpoB
0.8471

bd668

(bd668) NA
0.8403

bd1023

(bd1023) atpD
0.8351

bd890

(bd890) NA
0.8332

268061

hypothetical protein
0.8308

bd258

(bd258) HU
0.8232

bd598

(bd598) atpG
0.8176

bd1863

(bd1863) NA
0.8164

bd1094

(bd1094) FH2 superfamily
0.8123

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN03032 serine decarboxylase; Provisional cl18945 748.962 0 230 - 595 specific 166673
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 748.962 0 230 - 595 superfamily 267298

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre01.g038250.t1.2 AT1G43710.1 Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0006520 GO:0016831 GO:0004782 -

GO:0006520

cellular amino acid metabolic process

Details: 
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO Category: 
BP

GO:0016831

carboxy-lyase activity

Details: 
Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound.
GO Category: 
MF

GO:0004782

sulfinoalanine decarboxylase activity

Details: 
Catalysis of the reaction: 3-sulfino-L-alanine = hypotaurine + CO2.
GO Category: 
MF

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