bd598 (bd598) atpGThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd598	bd_26x41	(bd598) atpG	50633	51103	-	atpG

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0065

Most Highly Correlated Transcripts

ThpsCp014 (atpG) ATP synthase CF0 B' subunit 1	bd1318 (bd1318) atpF 0.9984	ThpsCp015 (atpF) ATP synthase CF0 B subunit 0.9984	bd1023 (bd1023) atpD 0.996	ThpsCp016 (atpD) ATP synthase CF1 delta subunit 0.996	bd1290 (bd1290) atpH 0.9925
ThpsCp013 (atpH) ATP synthase CF0 C subunit 0.9925	bd1378 (bd1378) atpI 0.9903	ThpsCp012 (atpI) ATP synthase CF0 A subunit 0.9903	ThpsCt001 (trnM(cau)) 0.9808

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
atpG		ATP synthase CF0 B' subunit; Validated	cl19113	188.272	4.12E-61	2 - 156	specific	214369
ApoLp-III_like superfamily		Apolipophorin-III and similar insect proteins; Exchangeable apolipoproteins play vital roles in the...	-	188.272	4.12E-61	2 - 156	superfamily	267466
ATP-synt_B		ATP synthase B/B' CF(0); Part of the CF(0) (base unit) of the ATP synthase. The base unit...	-	95.403	2.31E-25	25 - 154	multi-dom	109486

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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