1465 TLDc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1465 chr_1 TLDc 1592549 1594564 + TLDc

Synonyms

NCBI ID Ensembl Genomes exon ID
7445135 Thaps1465.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0178

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0281
 0.33

Most Highly Correlated Transcripts

bd392

(bd392) DEXDc
0.872

11744

AdoMet_MTases superfamily
0.8587

bd624

(bd624) Glyco_transf_34 superfamily
0.8422

3071

NA
0.8388

bd874

(bd874) NA
0.8304

23013

Trs65
0.8288

5902

hypothetical protein
0.8246

33109

QOR2
0.8227

9425

TPR_12
0.8216

9388

hypothetical protein
0.8155

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TLDc domain in TBC and LysM domain containing proteins; domain in TBC and LysM domain containing... cl02144 123.2 2.27E-32 417 - 596 specific 214733
TLD superfamily TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It&... - 123.2 2.27E-32 417 - 596 superfamily 261195

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48755 PHATRDRAFT_48755 181766 28267 Not available Not available Not available 556294

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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