11744 AdoMet_MTases superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11744	chr_22	AdoMet_MTases superfamily	333682	334898	-	AdoMet_MTases superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443702	Thaps11744.2, Thaps11744.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0178

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0281	0.33	5600 4000

Most Highly Correlated Transcripts

bd624 (bd624) Glyco_transf_34 superfamily 0.8764	30149 Solute_trans_a 0.8677	bd392 (bd392) DEXDc 0.8639	264316 PLN02826 0.8628	1465 TLDc 0.8587	8582 hypothetical protein 0.8575
bd874 (bd874) NA 0.8487	5671 hypothetical protein 0.845	262611 RabGAP-TBC 0.841	8003 PIG-L 0.8406

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AdoMet_MTases superfamily		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	-	130.326	5.39E-35	81 - 365	superfamily	266528

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	234606	185852	121885	Not available	AT2G21070.2	486208

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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