1553 PKc_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1553 chr_1 PKc_like superfamily 1820709 1822834 - PKc_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443119 Thaps1553.1, Thaps1553.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0213

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0274
 0.39

Most Highly Correlated Transcripts

262575

DHOD_1A_like
0.9172

35518

(GYK) PLN02295
0.8955

23616

Peptidase_A22B superfamily
0.8946

7546

COG1505
0.8933

5638

hypothetical protein
0.892

5319

DPPIV_N
0.8764

7597

2A0111
0.8761

3154

(Tp_HSF_1b) HSF_DNA-bind
0.8746

13427

AarF
0.8746

25162

hypothetical protein
0.8743

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 98.9373 2.37E-24 248 - 352 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 98.9373 2.37E-24 248 - 352 superfamily 260155
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 98.9373 2.37E-24 248 - 352 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 98.9373 2.37E-24 248 - 352 superfamily 260155
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 353.774 1.51E-116 379 - 667 superfamily 263920
S_TKc Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-... - 267.088 7.39E-84 382 - 635 multi-dom 214567
Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein... - 69.4751 1.36E-13 106 - 252 multi-dom 223736
Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein... - 69.4751 1.36E-13 106 - 252 multi-dom 223736

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004672 GO:0005524 GO:0006468 GO:0004713 GO:0004674 GO:0005952 GO:0008603 -

GO:0004672

protein kinase activity

Details: 
Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006468

protein phosphorylation

Details: 
The process of introducing a phosphate group on to a protein.
GO Category: 
BP

GO:0004713

protein tyrosine kinase activity

Details: 
Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
GO Category: 
MF

GO:0004674

protein serine/threonine kinase activity

Details: 
Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
GO Category: 
MF

GO:0005952

cAMP-dependent protein kinase complex

Details: 
An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer.
GO Category: 
CC

GO:0008603

cAMP-dependent protein kinase regulator activity

Details: 
Modulation of the activity of the enzyme cAMP-dependent protein kinase.
GO Category: 
MF

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