15688 MFS
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
15688 chr_22 MFS 442140 443549 + MFS

Synonyms

NCBI ID Ensembl Genomes exon ID
7443872 Thaps15688.2, Thaps15688.3, Thaps15688.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0186
 0.38

Most Highly Correlated Transcripts

38073

NAP
0.8669

14890

Cupin_8 superfamily
0.8652

268486

Glyco_transf_22 superfamily
0.8631

24632

PDCD2_C superfamily
0.8549

6012

hypothetical protein
0.8529

24314

hypothetical protein
0.8526

33088

Obg_CgtA
0.8521

268746

SXM1
0.8512

22441

hypothetical protein
0.8454

23922

(Tp_AP2-EREBP9) regulator [Rayko]
0.8445

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 68.4945 4.76E-13 13 - 396 superfamily 119392
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 68.4945 4.76E-13 13 - 396 superfamily 119392
MFS_1 Major Facilitator Superfamily; Major Facilitator Superfamily. - 66.6744 2.14E-12 16 - 335 multi-dom 254360

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22822 Not available 267101 321590 430104 Cre07.g316000.t1.2 AT1G27310.1 286573

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016021 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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