33088 Obg_CgtA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33088 chr_3 Obg_CgtA 251550 253049 - Obg_CgtA

Synonyms

NCBI ID Ensembl Genomes exon ID
7442476 Thaps33088.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0220

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0101
 0.32

Most Highly Correlated Transcripts

bd1709

(bd1709) NA
0.915

bd96

(bd96) eIF-3_zeta
0.8993

38073

NAP
0.8811

bd1876

(bd1876) NatB_MDM20 superfamily
0.8683

13572

(MTS1) PRK11893
0.864

bd1667

(bd1667) Mpp10
0.8627

34027

SrmB
0.8615

268486

Glyco_transf_22 superfamily
0.86

263845

RRM_SF superfamily
0.8598

37786

SrmB
0.8555

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Obg Obg GTPase; The Obg nucleotide binding protein subfamily has been implicated in stress response,... cl17170 250.419 1.33E-80 266 - 436 specific 206685
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 250.419 1.33E-80 266 - 436 superfamily 266525
GTP1_OBG superfamily GTP1/OBG; The N-terminal domain of B. subtilis GTPase obgE has the OBG fold, which is formed by... - 137.07 4.54E-38 109 - 264 superfamily 110047
Obg_CgtA Obg family GTPase CgtA; This model describes a univeral, mostly one-gene-per-genome GTP-binding... - 413.363 1.42E-141 109 - 437 multi-dom 233986

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd1331 PHATRDRAFT_bd1331 278293 65908 45555 Cre10.g433100.t1.2 AT5G18570.1 470774

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005525 -

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

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