1740 PDZ superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1740 chr_1 PDZ superfamily 2304132 2305473 - PDZ superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453417 Thaps1740.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0036

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0073
 0.47

Most Highly Correlated Transcripts

25495

ALDH_F6_MMSDH
0.9038

6701

hypothetical protein
0.8709

bd1842

(bd1842) NA
0.8692

bd1793

(bd1793) NA
0.8558

264610

Prolidase
0.8534

2911

hypothetical protein
0.8514

28651

(AAT1_1) PLN02644
0.8514

13459

HslU
0.8475

24113

PRK02237
0.8471

23827

N_Asn_amidohyd superfamily
0.8389

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PDZ superfamily PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif).... - 59.5468 3.40E-11 35 - 124 superfamily 260201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 262256 240034 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

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