25495 ALDH_F6_MMSDH
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25495 chr_19a_19 ALDH_F6_MMSDH 545212 547541 - ALDH_F6_MMSDH

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0424

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0243
 0.36

Most Highly Correlated Transcripts

bd410

(bd410) HNHc
0.947

bd1841

(bd1841) CAP10 superfamily
0.9324

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9304

28651

(AAT1_1) PLN02644
0.9181

269513

PTZ00461
0.9122

bd1808

(bd1808) NA
0.9118

bd1941

(bd1941) NA
0.9116

23047

hypothetical protein
0.9061

1740

PDZ superfamily
0.9038

22864

(SDH) GcvT
0.9006

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2; Methylmalonate... cl11961 734.708 0 55 - 548 specific 143404
ALDH-SF superfamily NAD(P)+-dependent aldehyde dehydrogenase superfamily; The aldehyde dehydrogenase superfamily (ALDH-... - 734.708 0 55 - 548 superfamily 264488
PLN02466 aldehyde dehydrogenase family 2 member - 178.463 5.96E-49 1 - 504 multi-dom 215259

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
41636 PHATRDRAFT_23467 PHATRDRAFT_23467 276895 Not available Not available Cre16.g675650.t1.2 AT2G14170.2 354299

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0008152 GO:0016491 GO:0004491 GO:0006573 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004491

methylmalonate-semialdehyde dehydrogenase (acylating) activity

Details: 
Catalysis of the reaction: 2-methyl-3-oxopropanoate + CoA + NAD+ = propanoyl-CoA + CO2 + NADH + H+.
GO Category: 
MF

GO:0006573

valine metabolic process

Details: 
The chemical reactions and pathways involving valine, 2-amino-3-methylbutanoic acid.
GO Category: 
BP

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