PHATRDRAFT_6387 membrane family (SapB)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_6387	chr_1	membrane family (SapB)	71617	72021	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0360

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0117	0.31	480 9100

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MgtC superfamily		MgtC family; The MgtC protein is found in an operon with the Mg2+ transporter protein MgtB. The...	-	83.1552	3.94E-21	5 - 131	superfamily	111223
SapB		Uncharacterized membrane protein [Function unknown]	-	123.585	1.54E-35	1 - 132	multi-dom	224204

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
22877		Not available	200880	118675	428627	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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