PHATRDRAFT_9547 replication factor c (activator 1) 4 (rfc)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_9547 chr_1 replication factor c (activator 1) 4 (rfc) 860881 862190 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0182

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0165
 0.45

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 93.3647 3.95E-23 33 - 174 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 93.3647 3.95E-23 33 - 174 superfamily 267297
Rep_fac_C superfamily Replication factor C C-terminal domain; This is the C-terminal domain of RFC (replication factor-C... - 59.8276 1.56E-11 249 - 336 superfamily 254867
Rep_fac_C superfamily Replication factor C C-terminal domain; This is the C-terminal domain of RFC (replication factor-C... - 59.8276 1.56E-11 249 - 336 superfamily 254867
rfc replication factor C small subunit; Reviewed - 310.266 1.01E-103 17 - 331 multi-dom 234763

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
416 Not available 196471 7408 424080 Cre06.g251800.t1.2 AT1G21690.1 551952

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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