PHATRDRAFT_47583 short-chain dehydrogenase reductase sdr (SDR_c)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47583	chr_14	short-chain dehydrogenase reductase sdr (SDR_c)	169741	170631	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0369

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0002	0.43	470 780

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SDR_c		classical (c) SDRs; SDRs are a functionally diverse family of oxidoreductases that have a single...	cl09931	192.499	1.10E-59	34 - 274	specific	212491
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	192.499	1.10E-59	34 - 274	superfamily	263925
fabG		3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	-	190.438	8.41E-59	29 - 279	multi-dom	235506

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
35740		Not available	Not available	216197	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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