35740 fabG
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35740 chr_7 fabG 1489846 1490985 + fabG

Synonyms

NCBI ID Ensembl Genomes exon ID
7447143 Thaps35740.1, Thaps35740.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0325

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0198
 0.40

Most Highly Correlated Transcripts

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9

268443

SAICAR_synt_Sc
0.8941

bd1841

(bd1841) CAP10 superfamily
0.8879

19158

GRX_PICOT_like
0.8759

269953

S49_Sppa_N_C
0.871

267979

HCO3_cotransp superfamily
0.8685

bd1934

(bd1934) NA
0.8651

bd690

(bd690) NA
0.8632

bd885

(bd885) NA
0.8541

bd848

(bd848) NA
0.8497

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SDR_c classical (c) SDRs; SDRs are a functionally diverse family of oxidoreductases that have a single... cl09931 199.432 8.80E-62 86 - 316 specific 212491
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 199.432 8.80E-62 86 - 316 superfamily 263925
fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional - 200.068 6.43E-62 79 - 321 multi-dom 235506

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47583 PHATRDRAFT_47583 Not available 216197 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016491 GO:0008667 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0008667

2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity

Details: 
Catalysis of the reaction: (2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate + NAD(+) = 2,3-dihydroxybenzoate + H(+) + NADH.
GO Category: 
MF

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