PHATRDRAFT_14572 splicing factorsubunit66kda (PRP11)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_14572 chr_15 splicing factorsubunit66kda (PRP11) 491681 492340 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0182

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CactinC_cactus superfamily Cactus-binding C-terminus of cactin protein; CactinC_cactus is the C-terminal 200 residues of the... - 74.312 4.58E-17 107 - 211 superfamily 264039
ZnF_U1 superfamily U1-like zinc finger; Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear... - 42.6247 2.88E-06 45 - 78 superfamily 197732
ZnF_U1 superfamily U1-like zinc finger; Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear... - 42.6247 2.88E-06 45 - 78 superfamily 197732
PRP11 Splicing factor 3a, subunit 2 [RNA processing and modification] - 198.743 2.74E-63 1 - 217 multi-dom 227571

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
40978 Not available 141743 167001 357810 Cre06.g252700.t1.2 AT2G32600.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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