PHATRDRAFT_38525 peptidyl-prolyl cis-transcyclophilin-type (cyclophilin_WD40)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_38525 chr_16 peptidyl-prolyl cis-transcyclophilin-type (cyclophilin_WD40) 314367 316608 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0232

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
cyclophilin_WD40 cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a... cl00197 287.821 2.17E-93 516 - 662 specific 238908
cyclophilin superfamily cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic... - 287.821 2.17E-93 516 - 662 superfamily 260252
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 85.8496 1.33E-18 43 - 216 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 69.7323 8.00E-13 25 - 314 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
33153 Not available 183189 245471 Not available Cre10.g453900.t1.2 AT3G44600.1 514914

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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