33153 cyclophilin superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
33153	chr_3	cyclophilin superfamily	423160	425539	-	cyclophilin superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444026	Thaps33153.5, Thaps33153.6, Thaps33153.3, Thaps33153.4, Thaps33153.2, Thaps33153.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0194

Most Highly Correlated Transcripts

12836 EEP superfamily 0.914	12899 AAA 0.8702	33454 Ac_CoA_lig_AcsA 0.8536	261179 Myotub-related 0.8437	7683 DUF3395 superfamily 0.8424	268655 HDAC_classII_2 0.8419
24529 hypothetical protein 0.8405	23085 VHS_ENTH_ANTH superfamily 0.8395	35266 (DYN1) DLP_1 0.8379	268049 (ATH1) HA2 0.8371

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
cyclophilin superfamily		cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic...	-	245.063	4.10E-77	511 - 658	superfamily	260252
WD40 superfamily		WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions...	-	69.286	3.69E-13	44 - 220	superfamily	238121

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_38525	PHATRDRAFT_38525	190171	245471	Not available	Cre10.g453900.t1.2	AT3G44600.1	514914

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

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