PHATRDRAFT_38879 tetratricopeptide tpr_2 (TPR_12)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_38879	chr_17	tetratricopeptide tpr_2 (TPR_12)	432176	434599	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0100

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0158	0.25	26000 260000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	47.3748	1.39E-06	372 - 486	superfamily	238112
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	47.3748	1.39E-06	372 - 486	superfamily	238112
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	47.3748	1.39E-06	372 - 486	superfamily	238112
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	47.3748	1.39E-06	372 - 486	superfamily	238112
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	47.3748	1.39E-06	372 - 486	superfamily	238112
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	47.3748	1.39E-06	372 - 486	superfamily	238112
TPR_12		Tetratricopeptide repeat; Tetratricopeptide repeat.	-	48.9126	3.26E-07	503 - 581	multi-dom	257749
TPR_12		Tetratricopeptide repeat; Tetratricopeptide repeat.	-	48.9126	3.26E-07	503 - 581	multi-dom	257749
TPR_12		Tetratricopeptide repeat; Tetratricopeptide repeat.	-	48.9126	3.26E-07	503 - 581	multi-dom	257749
TPR_12		Tetratricopeptide repeat; Tetratricopeptide repeat.	-	48.9126	3.26E-07	503 - 581	multi-dom	257749

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Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262708		Not available	198191	191530	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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