PHATRDRAFT_15472 stromal cell-derived factor 2-like 1
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_15472 chr_19 stromal cell-derived factor 2-like 1 406829 407434 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0096

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0060
 0.37

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MIR Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases; Domain... cl19745 40.4023 1.50E-05 3 - 52 specific 197746
Ins145_P3_rec superfamily Inositol 1,4,5-trisphosphate/ryanodine receptor; This domain corresponds to the ligand binding... - 40.4023 1.50E-05 3 - 52 superfamily 268098
MIR Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases; Domain... cl19745 40.4023 1.50E-05 3 - 52 specific 197746
Ins145_P3_rec superfamily Inositol 1,4,5-trisphosphate/ryanodine receptor; This domain corresponds to the ligand binding... - 40.4023 1.50E-05 3 - 52 superfamily 268098

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
30971 Not available 142989 207734 Not available Cre13.g571750.t1.2 AT2G25110.1 482323

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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