PHATRDRAFT_10148 dna-directed rna polymerase subunit rpb6 (PLN00152)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_10148	chr_2	dna-directed rna polymerase subunit rpb6 (PLN00152)	327269	327658	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0243

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0123	0.20	1.1 4.6

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN00152		DNA-directed RNA polymerase; Provisional	cl14651	158.108	3.43E-50	4 - 129	specific	177755
RNA_pol_Rpb6 superfamily		RNA polymerase Rpb6; Rpb6 is an essential subunit in the eukaryotic polymerases Pol I, II and III....	-	158.108	3.43E-50	4 - 129	superfamily	246684

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262598		Not available	194432	152963	47669	Cre01.g002200.t1.1	AT5G51940.1	286529

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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