PHATRDRAFT_49374 replication factor40-kda subunit (PLN03025)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49374 chr_22 replication factor40-kda subunit (PLN03025) 68418 69566 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0194

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 97.9871 1.08E-24 47 - 180 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 97.9871 1.08E-24 47 - 180 superfamily 267297
Rep_fac_C superfamily Replication factor C C-terminal domain; This is the C-terminal domain of RFC (replication factor-C... - 80.6283 3.34E-19 253 - 331 superfamily 254867
Rep_fac_C superfamily Replication factor C C-terminal domain; This is the C-terminal domain of RFC (replication factor-C... - 80.6283 3.34E-19 253 - 331 superfamily 254867
PLN03025 replication factor C subunit; Provisional - 579.762 0 32 - 332 multi-dom 178596

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
8830 Not available 207120 47641 439101 Cre07.g337150.t1.2 AT1G63160.1 332696

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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