PHATRDRAFT_11703 transducin-like 3 (WD40)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_11703 chr_6 transducin-like 3 (WD40) 823585 826044 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0243

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0102
 0.21

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 78.1456 5.53E-16 3 - 185 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 78.1456 5.53E-16 3 - 185 superfamily 238121
Utp13 superfamily Utp13 specific WD40 associated domain; Utp13 is a component of the five protein Pwp2 complex that... - 135.002 1.45E-36 677 - 817 superfamily 254932
Utp13 superfamily Utp13 specific WD40 associated domain; Utp13 is a component of the five protein Pwp2 complex that... - 135.002 1.45E-36 677 - 817 superfamily 254932
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 78.1456 5.53E-16 3 - 185 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 82.8291 8.52E-17 47 - 476 multi-dom 225201
COG2319 FOG: WD40 repeat [General function prediction only] - 82.8291 8.52E-17 47 - 476 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268735 Not available 211484 236801 Not available Cre07.g344050.t1.1 AT5G16750.1 309482

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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