PHATRDRAFT_12234 nucleotidyltransferase family protein (PAP_central)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_12234 chr_7 nucleotidyltransferase family protein (PAP_central) 771526 772879 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0393

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0117
 0.31

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NT_PAP_TUTase Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases; Poly(... cl11966 71.8195 1.98E-15 51 - 182 specific 143392
Rel-Spo_like superfamily RelA- and SpoT-like ppGpp Synthetases and Hydrolases, catalytic domain; The Rel-Spo superfamily... - 71.8195 1.98E-15 51 - 182 superfamily 264491
PAP_RNA-bind superfamily Poly(A) polymerase predicted RNA binding domain; Based on its similarity structurally to the RNA... - 50.7274 5.29E-08 382 - 421 superfamily 252881
PAP_central Poly(A) polymerase central domain; The central domain of Poly(A) polymerase shares structural... - 343.484 3.85E-115 21 - 380 multi-dom 252883

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
13920 Not available 203479 242988 445487 Cre10.g433750.t1.1 AT1G17980.1 474162

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments