PHATRDRAFT_43865
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43865 chr_3 254421 258095 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0215

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0075
 0.22

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Smr superfamily Smr domain; This family includes the Smr (Small MutS Related) proteins, and the C-terminal region... - 46.1371 5.04E-06 1088 - 1173 superfamily 261374
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 36.2266 0.00665515 604 - 648 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 36.2266 0.00665515 604 - 648 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 36.2266 0.00665515 604 - 648 superfamily 261658

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23650 Not available 257711 249349 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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