20335 Rotamase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20335 chr_3 Rotamase 709182 709361 - Rotamase

Synonyms

NCBI ID Ensembl Genomes exon ID
7444730 Thaps20335.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0022

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0129
 0.19

Most Highly Correlated Transcripts

270222

0.984

39813

Chloroa_b-bind superfamily
0.9656

4882

(Lhcr4) fucoxanthin chl a/c light-harvesting protein
0.9599

22747

(Lhcr10) fucoxanthin chlorophyll a/c light-harvesting protein
0.9567

1049

MviM
0.9525

26246

(Lhcr3) fucoxanthin chl a/c light-harvesting protein
0.9516

21472

NA
0.9514

38122

Chloroa_b-bind superfamily
0.9509

3816

(Lhcr7) fucoxanthin chl a/c light-harvesting protein
0.9493

2342

(Lhcr11) fucoxanthin chlorophyll a/c light-harvesting protein
0.9491

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rotamase PPIC-type PPIASE domain; Rotamases increase the rate of protein folding by catalyzing the... cl08278 63.0712 6.76E-15 4 - 54 specific 250020
Rotamase_2 superfamily PPIC-type PPIASE domain; PPIC-type PPIASE domain. - 63.0712 6.76E-15 4 - 54 superfamily 263564

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
34782 Not available 202620 231600 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016853 -

GO:0016853

isomerase activity

Details: 
Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
GO Category: 
MF

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