20640 (Tp_CCCH11) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20640 chr_1 (Tp_CCCH11) regulator [Rayko] 521966 524335 - regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7442874 Thaps20640.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0126

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0080
 0.40

Most Highly Correlated Transcripts

8990

DAP2
0.8718

25162

hypothetical protein
0.8695

269540

(CHC) Clathrin
0.8568

11165

hypothetical protein
0.8523

24007

(Tp_bHLH1_PAS) regulator [Rayko]
0.85

bd1815

(bd1815) NA
0.8478

4445

hypothetical protein
0.8469

5902

hypothetical protein
0.8458

11294

XendoU
0.8441

11438

hypothetical protein
0.8426

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49355 PHATRDRAFT_49355 215162 113750 Not available Not available AT5G16540.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003676 GO:0008152 GO:0016491 -

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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