20662 CactinC_cactus
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20662 chr_1 CactinC_cactus 655814 658018 - CactinC_cactus

Synonyms

NCBI ID Ensembl Genomes exon ID
7449102 Thaps20662.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0366

Most Highly Correlated Transcripts

13448

Sec1
0.9371

21119

hypothetical protein
0.9359

22686

hypothetical protein
0.9174

1057

PIH1 superfamily
0.9123

5066

hypothetical protein
0.9099

36372

S_TKc
0.9096

22284

Nudix_Hydrolase superfamily
0.9094

6086

hypothetical protein
0.9085

23560

hypothetical protein
0.9075

268825

COG5647
0.9065

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CactinC_cactus Cactus-binding C-terminus of cactin protein; CactinC_cactus is the C-terminal 200 residues of the... cl10717 252.966 4.30E-80 588 - 711 specific 255517
CactinC_cactus superfamily Cactus-binding C-terminus of cactin protein; CactinC_cactus is the C-terminal 200 residues of the... - 252.966 4.30E-80 588 - 711 superfamily 264039
Cactin_mid superfamily Conserved mid region of cactin; This is the conserved middle region of a family of proteins... - 138.211 2.57E-37 272 - 506 superfamily 255896

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 201799 312397 461772 Cre09.g398650.t1.2 AT1G03910.1 352910

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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