20777 (Tp_TAZ1) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20777 chr_1 (Tp_TAZ1) regulator [Rayko] 1237628 1241498 - regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7451433 Thaps20777.2, Thaps20777.3, Thaps20777.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0037

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0198
 0.40

Most Highly Correlated Transcripts

3447

hypothetical protein
0.8989

9643

(Tp_bZIP8) regulator [Rayko]
0.88

bd392

(bd392) DEXDc
0.8731

24613

Sad1_UNC
0.8703

4047

hypothetical protein
0.866

268194

(Tp_Myb4R1b) SANT
0.8659

8762

SNF2_N
0.8597

2865

hypothetical protein
0.8532

4632

hypothetical protein
0.8422

263610

COG3899
0.8368

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_41559 PHATRDRAFT_41559 Not available 282702 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003712 GO:0005634 GO:0006355 GO:0004339 -

GO:0003712

transcription cofactor activity

Details: 
Interacting selectively and non-covalently with a regulatory transcription factor and also with the basal transcription machinery in order to modulate transcription. Cofactors generally do not bind DNA, but rather mediate protein-protein interactions between regulatory transcription factors and the basal transcription machinery.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

GO:0004339

glucan 1,4-alpha-glucosidase activity

Details: 
Catalysis of the hydrolysis of terminal (1->4)-linked alpha-D-glucose residues successively from non-reducing ends of the chains with release of beta-D-glucose.
GO Category: 
MF

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