24613 Sad1_UNC
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24613 chr_13 Sad1_UNC 229145 232974 + Sad1_UNC

Synonyms

NCBI ID Ensembl Genomes exon ID
7445715 Thaps24613.2, Thaps24613.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0039

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0090
 0.39

Most Highly Correlated Transcripts

261357

NAD_binding_8 superfamily
0.9071

263610

COG3899
0.8942

4632

hypothetical protein
0.8856

24063

COG3899
0.8816

263599

COG3899
0.8706

20777

(Tp_TAZ1) regulator [Rayko]
0.8703

2714

hypothetical protein
0.8576

9148

hypothetical protein
0.8498

3447

hypothetical protein
0.8373

8762

SNF2_N
0.8358

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sad1_UNC superfamily Sad1 / UNC-like C-terminal; The C. elegans UNC-84 protein is a nuclear envelope protein that is... - 118.181 2.85E-30 326 - 446 superfamily 203750
Sad1_UNC superfamily Sad1 / UNC-like C-terminal; The C. elegans UNC-84 protein is a nuclear envelope protein that is... - 118.181 2.85E-30 326 - 446 superfamily 203750

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45250 PHATRDRAFT_45250 Not available 172091 Not available Cre12.g517300.t1.1 AT1G71360.1 460966

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004308 -

GO:0004308

exo-alpha-sialidase activity

Details: 
Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
GO Category: 
MF

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