20798 Cnd1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20798 chr_1 Cnd1 1330606 1335052 + Cnd1

Synonyms

NCBI ID Ensembl Genomes exon ID
7451450 Thaps20798.1, Thaps20798.3, Thaps20798.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0082

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0143
 0.26

Most Highly Correlated Transcripts

bd950

(bd950) NA
0.9758

bd1983

(bd1983) RecA-like_NTPases superfamily
0.9667

bd1214

(bd1214) KISc_C_terminal
0.9614

bd1173

(bd1173) S_TKc
0.9548

bd1081

(bd1081) NA
0.9504

bd439

(bd439) POLBc_alpha
0.9412

3124

Cnd2 superfamily
0.9341

bd843

(bd843) NA
0.934

1393

(CAP1) Smc
0.9328

7092

DOMON_DOH
0.9288

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cnd1 non-SMC mitotic condensation complex subunit 1; The three non-SMC (structural maintenance of... - 218.207 1.31E-64 1074 - 1239 multi-dom 257244

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43956 PHATRDRAFT_43956 258780 298752 Not available Cre10.g432500.t1.2 AT3G57060.1 348671

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005634 GO:0007067 GO:0030261 -

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0007067

mitosis

Details: 
A cell cycle process comprising the steps by which the nucleus of a eukaryotic cell divides; the process involves condensation of chromosomal DNA into a highly compacted form. Canonically, mitosis produces two daughter nuclei whose chromosome complement is identical to that of the mother cell.
GO Category: 
BP

GO:0030261

chromosome condensation

Details: 
The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells.
GO Category: 
BP

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