20834 DLP_2Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20834	chr_1	DLP_2	1544395	1546949	+	DLP_2

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445133	Thaps20834.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0188

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0033	0.48	0.000000021 0.013

Most Highly Correlated Transcripts

bd1777 (bd1777) NA 0.8884	bd392 (bd392) DEXDc 0.8514	bd393 (bd393) nst superfamily 0.8495	bd446 (bd446) HrpA 0.8426	bd1869 (bd1869) SET 0.841	bd1949 (bd1949) NA 0.8265
bd687 (bd687) NA 0.816	bd518 (bd518) p450 superfamily 0.8145	bd168 (bd168) Peptidase_S9 superfamily 0.8116	36037 Trypsin_2 0.8036

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DLP_2		Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins; The dynamin...	cl17170	178.894	4.98E-52	165 - 405	specific	206739
Ras_like_GTPase superfamily		Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase...	-	178.894	4.98E-52	165 - 405	superfamily	266525

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	239477	179702	203749	Cre14.g616600.t1.2	AT1G03160.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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