20922 Sec10 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20922 chr_1 Sec10 superfamily 2019690 2023364 + Sec10 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443166 Thaps20922.4, Thaps20922.2, Thaps20922.1, Thaps20922.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0172

Most Highly Correlated Transcripts

6121

hypothetical protein
0.927

264441

Glycos_transf_1 superfamily
0.911

2145

hypothetical protein
0.9109

23051

hypothetical protein
0.9105

26212

(COP2) COG5096
0.9048

35424

PKc_like superfamily
0.9023

22963

WD40 superfamily
0.9005

262103

C2_PLC_like
0.8983

7846

hypothetical protein
0.898

7898

DUF676 superfamily
0.8975

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sec10 superfamily Exocyst complex component Sec10; This family contains the Sec10 component (approximately 650... - 83.1525 1.96E-16 281 - 1105 superfamily 254184

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48959 PHATRDRAFT_48959 239744 260517 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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