262103 C2_PLC_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262103 chr_4 C2_PLC_like 643047 644356 - C2_PLC_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7447488 Thaps262103.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0382

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0080
 0.40

Most Highly Correlated Transcripts

264441

Glycos_transf_1 superfamily
0.9119

35713

hypothetical protein
0.9081

20773

hypothetical protein
0.9016

262422

DEXDc
0.8996

20922

Sec10 superfamily
0.8983

3161

hypothetical protein
0.8979

12836

EEP superfamily
0.8972

10975

hypothetical protein
0.8945

261310

COG3349
0.8943

25419

AP_muniscins_like_MHD
0.8935

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC); PLCs are involved in the... cl14603 132.665 3.94E-37 290 - 435 specific 175974
C2 superfamily C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-... - 132.665 3.94E-37 290 - 435 superfamily 265430
PI-PLC-Y superfamily Phosphatidylinositol-specific phospholipase C, Y domain; This associates with pfam00388 to form a... - 107.22 3.35E-28 165 - 272 superfamily 265449

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 238106 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004435 GO:0006629 GO:0007165 GO:0007242 -

GO:0004435

phosphatidylinositol phospholipase C activity

Details: 
Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H(2)O = 1,2-diacylglycerol + 1D-myo-inositol 1,4,5-trisphosphate + H(+).
GO Category: 
MF

GO:0006629

lipid metabolic process

Details: 
The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO Category: 
BP

GO:0007165

signal transduction

Details: 
The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO Category: 
BP

GO:0007242

NA

Details: 
NA
GO Category: 
NA

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