20944 Glyco_tranf_GTA_type superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20944	chr_1	Glyco_tranf_GTA_type superfamily	2136103	2139313	+	Glyco_tranf_GTA_type superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447639	Thaps20944.3, Thaps20944.1, Thaps20944.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0399

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0175	0.42	0.0000028 4700

Most Highly Correlated Transcripts

bd716 (bd716) MviM 0.9321	10474 hypothetical protein 0.9311	3310 hypothetical protein 0.9299	5066 hypothetical protein 0.9281	9174 DUF563 0.9261	32139 hypothetical protein 0.9225
261589 S49_Sppa_N_C 0.9225	8445 hypothetical protein 0.9215	2451 PH-like superfamily 0.9208	1244 hypothetical protein 0.9149

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Glyco_tranf_GTA_type superfamily		Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a...	-	86.3768	1.45E-18	687 - 794	superfamily	264347

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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