2451 PH-like superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
2451	chr_2	PH-like superfamily	1041977	1043836	+	PH-like superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444637	Thaps2451.1, Thaps2451.3, Thaps2451.2, Thaps2451.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0141

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0152	0.38	0.14 0.024

Most Highly Correlated Transcripts

32139 hypothetical protein 0.9318	25325 hypothetical protein 0.9287	42646 PRK04342 0.9282	20944 Glyco_tranf_GTA_type superfamily 0.9208	15819 Arginase_HDAC superfamily 0.9196	268652 ATG11 superfamily 0.9188
1244 hypothetical protein 0.9175	263404 Peptidase_C1 superfamily 0.9122	3500 hypothetical protein 0.9078	19435 PTZ00184 0.9075

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PH-like superfamily		Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like and...	-	62.1564	8.94E-12	112 - 190	superfamily	266526

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_46733	PHATR_46733	238425	326377	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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