Phatr_hclust_0114 Hierarchical Clustering
Phaeodactylum tricornutum
| Cluster Plot | Conditions Plot | Dendrogram |
|---|---|---|
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| GO ID | Go Term | p-value | q-value | Cluster |
|---|---|---|---|---|
| GO:0009086 | methionine biosynthesis | 0.00029461 | 0.921835 | Phatr_hclust_0114 |
| GO:0006021 | myo-inositol biosynthesis | 0.00716226 | 1 | Phatr_hclust_0114 |
| GO:0006563 | L-serine metabolism | 0.014275 | 1 | Phatr_hclust_0114 |
| GO:0006241 | CTP biosynthesis | 0.0213385 | 1 | Phatr_hclust_0114 |
| GO:0006544 | glycine metabolism | 0.0213385 | 1 | Phatr_hclust_0114 |
| GO:0006183 | GTP biosynthesis | 0.0213385 | 1 | Phatr_hclust_0114 |
| GO:0009088 | threonine biosynthesis | 0.0213385 | 1 | Phatr_hclust_0114 |
| GO:0006228 | UTP biosynthesis | 0.0213385 | 1 | Phatr_hclust_0114 |
| GO:0006730 | one-carbon compound metabolism | 0.0283531 | 1 | Phatr_hclust_0114 |
| GO:0006801 | superoxide metabolism | 0.0283531 | 1 | Phatr_hclust_0114 |
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PHATRDRAFT_37111 : cog3781: membrane protein (Bestrophin superfamily) |
PHATRDRAFT_22896 : (ArsA_ATPase) |
PHATRDRAFT_12239 : adenylate kinase (adk) |
PHATRDRAFT_36597 : transitional endoplasmic reticulum atpase ter94 (CDC48) |
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PHATRDRAFT_51136 : phosphoenolpyruvate carboxylase (PEPcase) |
PHATRDRAFT_47010 : transducin family protein wd-40 repeat family protein (WD40 superfamily) |
PHATRDRAFT_47954 : mitochondrial phosphate carrier protein (Mito_carr) |
PHATRDRAFT_23399 : (metH) |
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PHATRDRAFT_12254 : fkbp-type peptidyl-prolyl cis-trans isomerase (FkpA) |
PHATRDRAFT_45120 : myo-inositol-1-phosphate synthase (PLN02438) |
PHATRDRAFT_41172 : calr_chlrecalreticulin precursor (Calreticulin) |
PHATRDRAFT_18319 : s-adenosyl-l-homocysteine hydrolase (PRK05476) |
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PHATRDRAFT_15852 : copper zinc superoxide dismutasensodb (Cu-Zn_Superoxide_Dismutase) |
PHATRDRAFT_6756 : (HAM1) |
PHATRDRAFT_46626 : isochorismatase hydrolase (cysteine_hydrolases) |
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PHATRDRAFT_10757 : aspartate-semialdehyde dehydrogenase (PLN02383) |
PHATRDRAFT_42104 : nucleoside diphosphate kinase (NDPk_I) |
PHATRDRAFT_44425 : asparagine-linked glycosylation 12 homolog (alpha--mannosyltransferase) (Glyco_transf_22 superfamily) |
PHATRDRAFT_46281 : cg9915-isoform b |
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PHATRDRAFT_34526 : argininosuccinate lyase (PLN02646) |
PHATRDRAFT_18665 : shm4 (serine hydroxymethyltransferase 4) glycine hydroxymethyltransferase (SHMT) |
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PHATRDRAFT_42458 : phosphoserine aminotransferase (AAT_I) |
PHATRDRAFT_41063 : phosphoglycerate mutase (HP_PGM_like) |
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PHATRDRAFT_13174 : ascorbate peroxidase (ascorbate_peroxidase) |
PHATRDRAFT_14995 : cell division protein (FtsZ_type1) |
PHATRDRAFT_54590 : (Tic22 superfamily) |
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PHATRDRAFT_8058 : ankyrin repeat protein mbp3_16 (ANK) |
PHATRDRAFT_20708 : aspartyl aminopeptidase (M18_DAP) |
PHATRDRAFT_9956 : ac008051_10identical to gene zw10 from arabidopsis thaliana gb (His_Phos_1) |
PHATRDRAFT_34747 : n-anthranilate isomerase (PRAI) |
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PHATRDRAFT_52268 : carboxylic ester hydrolase family protein (Peptidase_S9 superfamily) |
PHATRDRAFT_54285 : p-atpase family transporter: cation (P-ATPase-V) |
PHATRDRAFT_22388 : membrane protein (PRX5_like) |
PHATRDRAFT_9904 : haloacid dehalogenase-like hydrolase-like (Hydrolase_3) |
| Condition | Condition | Difference | FDR |
|---|---|---|---|
| Re-illuminated_6h | Re-illuminated_6h | 0.139 | 0.469565 |
| Copper_SH | Copper_SH | -0.045 | 0.571729 |
| Green_vs_Red_24h | Green_vs_Red_24h | 0.131 | 0.161149 |
| Silver_SH | Silver_SH | 0.129 | 0.0848485 |
| Cadmium_1.2mg | Cadmium_1.2mg | -0.179 | 0.00104167 |
| BlueLight_24h | BlueLight_24h | -0.034 | 0.927928 |
| GreenLight_0.5h | GreenLight_0.5h | -1.506 | 0.000458716 |
| RedLight_6h | RedLight_6h | 0.010 | 0.958214 |
| light_16hr_dark_7.5hr | light_16hr_dark_7.5hr | 0.000 | 1 |
| GreenLight_24h | GreenLight_24h | -0.052 | 0.820026 |
| light_6hr | light_6hr | 0.687 | 0.000561798 |
| dark_8hr_light_3hr | dark_8hr_light_3hr | 0.791 | 0.00060241 |
| Blue_vs_Green_6h | Blue_vs_Green_6h | 0.058 | 0.483691 |
| Ammonia_SH | Ammonia_SH | -0.179 | 0.401884 |
| Simazine_SH | Simazine_SH | -1.179 | 0.000423729 |
| Oil_SH | Oil_SH | -0.248 | 0.00384615 |
| Salinity_15ppt_SH | Salinity_15ppt_SH | -0.285 | 0.00478261 |
| Cadmium_SH | Cadmium_SH | -0.308 | 0.00263158 |
| Blue_vs_Red_24h | Blue_vs_Red_24h | 0.149 | 0.198857 |
| highlight_0to6h | highlight_0to6h | 0.359 | 0.000806452 |
| BlueLight_0.5h | BlueLight_0.5h | -2.389 | 0.000462963 |
| Dispersant_SH | Dispersant_SH | -0.207 | 0.0200704 |
| light_16hr_dark_4hr | light_16hr_dark_4hr | 0.211 | 0.0244094 |
| light_15.5hr | light_15.5hr | 0.417 | 0.0107143 |
| light_10.5hr | light_10.5hr | 0.189 | 0.32963 |
| Dispersed_oil_SH | Dispersed_oil_SH | -0.244 | 0.01 |
| Si_free | Si_free | -0.001 | 0.988477 |
| Re-illuminated_0.5h | Re-illuminated_0.5h | -2.328 | 0.000396825 |
| Mixture_SH | Mixture_SH | -0.104 | 0.667342 |
| Blue_vs_Red_6h | Blue_vs_Red_6h | 0.031 | 0.901228 |
| light_16hr_dark_30min | light_16hr_dark_30min | 0.532 | 0.00136986 |
| BlueLight_6h | BlueLight_6h | 0.042 | 0.783765 |
| highlight_12to48h | highlight_12to48h | 1.051 | 0.000555556 |
| RedLight_24h | RedLight_24h | -0.183 | 0.128342 |
| Dark_treated | Dark_treated | -3.782 | 0.000446429 |
| GreenLight_6h | GreenLight_6h | -0.017 | 0.909917 |
| Cadmium_0.12mg | Cadmium_0.12mg | 0.028 | 0.395354 |
| Blue_vs_Green_24h | Blue_vs_Green_24h | 0.018 | 0.816842 |
| RedLight_0.5h | RedLight_0.5h | -1.225 | 0.000555556 |
| Green_vs_Red_6h | Green_vs_Red_6h | -0.027 | 0.890116 |
| Re-illuminated_24h | Re-illuminated_24h | 0.106 | 0.371406 |
