Phatr_hclust_0411 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

GO Enrichment

GO ID Go Term p-value q-value Cluster
GO:0006508 proteolysis and peptidolysis 0.0198037 1 Phatr_hclust_0411
GO:0007018 microtubule-based movement 0.078642 1 Phatr_hclust_0411
GO:0006512 ubiquitin cycle 0.0986411 1 Phatr_hclust_0411
GO:0006511 ubiquitin-dependent protein catabolism 0.115816 1 Phatr_hclust_0411
GO:0006464 protein modification 0.158622 1 Phatr_hclust_0411
GO:0016567 protein ubiquitination 0.17931 1 Phatr_hclust_0411
GO:0006468 protein amino acid phosphorylation 0.380037 1 Phatr_hclust_0411
GO:0006355 regulation of transcription, DNA-dependent 0.45797 1 Phatr_hclust_0411
GO:0006118 electron transport 0.473356 1 Phatr_hclust_0411

Members

PHATRDRAFT_46342 :
PHATRDRAFT_45770 : mgc83491 protein (Thioredoxin_like superfamily)
PHATRDRAFT_34014 : cf211_brare upf0364 protein c6orf211 homolog (DUF89)
PHATRDRAFT_34844 :
PHATRDRAFT_47082 :
PHATRDRAFT_42591 : (CRCB)
PHATRDRAFT_40254 : (DDE_Tnp_1_7 superfamily)
PHATRDRAFT_33767 :
PHATRDRAFT_13057 : transcriptional co-repressor sin3a isoform 5 (PAH)
PHATRDRAFT_43025 : esterase-like protein (Abhydrolase_6)
PHATRDRAFT_44342 :
PHATRDRAFT_45412 : (ZnMc superfamily)
PHATRDRAFT_13114 : ubiquitin-conjugating enzymej1 (UBCc)
PHATRDRAFT_8475 : trna pseudouridine synthase a (PseudoU_synth superfamily)
PHATRDRAFT_54748 : magnesium transporter (MgtE)
PHATRDRAFT_46562 : (Peptidase_S41_TRI)
PHATRDRAFT_32462 : tesmin tso1-like cxc domain-containing protein (TCR)
PHATRDRAFT_33046 : codanin 1
PHATRDRAFT_35785 :
PHATRDRAFT_974 : ubiquitin-specific protease (Peptidase_C19 superfamily)
PHATRDRAFT_43018 : nadp adrenodoxin-like ferredoxin reductase (PLN02852)
PHATRDRAFT_34516 :
PHATRDRAFT_43362 : establishment of cohesion 1 homolog 2 (zf-C2H2_3)
PHATRDRAFT_12044 : abc1 family protein (AarF)
PHATRDRAFT_45906 : histone deacetylase 6 (HDAC_classII)
PHATRDRAFT_46485 :
PHATRDRAFT_10089 : hal3a protein (Flavoprotein superfamily)
PHATRDRAFT_39905 :
PHATRDRAFT_10102 : (RRM_CNOT4)

Conditions

Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h 0.392 0.0113208
Copper_SH Copper_SH -0.084 0.329233
Green_vs_Red_24h Green_vs_Red_24h -0.185 0.0893519
Silver_SH Silver_SH -0.337 0.000555556
Cadmium_1.2mg Cadmium_1.2mg -0.023 0.783952
BlueLight_24h BlueLight_24h 0.137 0.412879
GreenLight_0.5h GreenLight_0.5h 1.527 0.000458716
RedLight_6h RedLight_6h 0.706 0.000694444
light_16hr_dark_7.5hr light_16hr_dark_7.5hr 0.000 0.980594
GreenLight_24h GreenLight_24h 0.236 0.0329787
light_6hr light_6hr -0.036 0.886129
dark_8hr_light_3hr dark_8hr_light_3hr -0.119 0.526487
Blue_vs_Green_6h Blue_vs_Green_6h -0.147 0.0610465
Ammonia_SH Ammonia_SH -0.087 0.706048
Simazine_SH Simazine_SH -0.209 0.0443359
Oil_SH Oil_SH -0.452 0.000666667
Salinity_15ppt_SH Salinity_15ppt_SH -0.375 0.00117647
Cadmium_SH Cadmium_SH -0.101 0.299603
Blue_vs_Red_24h Blue_vs_Red_24h -0.283 0.0406667
highlight_0to6h highlight_0to6h 0.249 0.00568182
BlueLight_0.5h BlueLight_0.5h 1.913 0.000462963
Dispersant_SH Dispersant_SH -0.298 0.00852273
light_16hr_dark_4hr light_16hr_dark_4hr -0.008 0.949689
light_15.5hr light_15.5hr 0.127 0.57894
light_10.5hr light_10.5hr -0.148 0.533333
Dispersed_oil_SH Dispersed_oil_SH -0.459 0.000675676
Si_free Si_free 0.100 0.383438
Re-illuminated_0.5h Re-illuminated_0.5h 2.073 0.000396825
Mixture_SH Mixture_SH -0.502 0.0406374
Blue_vs_Red_6h Blue_vs_Red_6h -0.357 0.0177966
light_16hr_dark_30min light_16hr_dark_30min 0.127 0.57194
BlueLight_6h BlueLight_6h 0.350 0.00973154
highlight_12to48h highlight_12to48h 0.205 0.226136
RedLight_24h RedLight_24h 0.420 0.000943396
Dark_treated Dark_treated 0.008 0.98487
GreenLight_6h GreenLight_6h 0.497 0.00111111
Cadmium_0.12mg Cadmium_0.12mg 0.022 0.587418
Blue_vs_Green_24h Blue_vs_Green_24h -0.098 0.125455
RedLight_0.5h RedLight_0.5h 1.255 0.000555556
Green_vs_Red_6h Green_vs_Red_6h -0.210 0.187132
Re-illuminated_24h Re-illuminated_24h 0.426 0.000657895

Motifs

MEME Output