21211 O-FucT_likeThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
21211	chr_2	O-FucT_like	640129	641962	-	O-FucT_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444081	Thaps21211.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0085

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0256	0.42	0.0000000000014 1.1

Most Highly Correlated Transcripts

bd1857 (bd1857) DnaJ 0.9169	261126 DadA 0.9098	263515 RimL 0.8936	4353 O-FucT_like 0.8915	18469 FkpA 0.8889	7942 hypothetical protein 0.8879
261211 FGE-sulfatase superfamily 0.8874	16295 FBPase 0.8818	780 Glf 0.8782	25068 hypothetical protein 0.8779

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
O-FucT_like		GDP-fucose protein O-fucosyltransferase and related proteins; O-fucosyltransferase-like proteins...	cl16914	112.896	1.63E-28	413 - 556	specific	211383
O-FucT_like superfamily		GDP-fucose protein O-fucosyltransferase and related proteins; O-fucosyltransferase-like proteins...	-	112.896	1.63E-28	413 - 556	superfamily	266487

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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