21339 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21339 chr_2 hypothetical protein 1331528 1333635 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7450410 Thaps21339.2, Thaps21339.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0431

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0035
 0.44

Most Highly Correlated Transcripts

10479

hypothetical protein
0.8894

1197

RhaT
0.8881

2646

hypothetical protein
0.8784

24096

Aa_trans superfamily
0.8715

7311

LSm8
0.8714

22864

(SDH) GcvT
0.8666

28651

(AAT1_1) PLN02644
0.8636

3260

hypothetical protein
0.8598

4482

hypothetical protein
0.859

24460

hypothetical protein
0.859

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48634 PHATRDRAFT_48634 148429 199300 Not available Cre26.g756897.t1.1 AT1G78420.2 354883

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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