21617 Glyco_transf_15 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
21617	chr_3	Glyco_transf_15 superfamily	249970	250957	+	Glyco_transf_15 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442475	Thaps21617.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0109

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0163	0.38	0.012 41

Most Highly Correlated Transcripts

bd1822 (bd1822) SCP superfamily 0.8396	262567 Aldo_ket_red 0.8188	22246 hypothetical protein 0.8067	10460 hypothetical protein 0.7906	11664 DUF3510 0.7872	18503 PDI_a_family 0.7854
21316 hypothetical protein 0.7837	7334 hypothetical protein 0.7785	23796 hypothetical protein 0.7742	bd779 (bd779) SCP superfamily 0.7739

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Glyco_transf_15 superfamily		Glycolipid 2-alpha-mannosyltransferase; This is a family of alpha-1,2 mannosyl-transferases...	-	103.229	1.71E-25	39 - 228	superfamily	261169

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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