21785 Pyr_redox_2Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
21785	chr_3	Pyr_redox_2	1141477	1142907	-	Pyr_redox_2

Synonyms

NCBI ID	Ensembl Genomes exon ID
7441876	Thaps21785.1, Thaps21785.2, Thaps21785.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0201

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0002	0.43

Most Highly Correlated Transcripts

bd1155 (bd1155) GCS superfamily 0.9498	5180 hypothetical protein 0.9034	25295 Gst 0.863	21067 FMN_red 0.8543	269866 Gst 0.8399	1060 GFA superfamily 0.82
25012 hypothetical protein 0.8089	656 ECM4 0.8018	2399 Str_synth superfamily 0.7704	17073 DUF1295 superfamily 0.7608

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Pyr_redox_2		Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II...	-	88.5824	2.25E-20	5 - 289	multi-dom	254568

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Cre12.g556228.t1.1	AT3G44190.1	286623

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006118 GO:0016491 GO:0015036 GO:0003954 -

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