656 ECM4
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
656 chr_10 ECM4 235638 237088 + ECM4

Synonyms

NCBI ID Ensembl Genomes exon ID
7447022 Thaps656.3, Thaps656.4, Thaps656.1, Thaps656.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0313

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0001
 0.47

Most Highly Correlated Transcripts

bd1155

(bd1155) GCS superfamily
0.9638

21067

FMN_red
0.8494

10169

hypothetical protein
0.8142

21785

Pyr_redox_2
0.8018

25012

hypothetical protein
0.7727

5180

hypothetical protein
0.7683

25295

Gst
0.734

25159

hypothetical protein
0.7323

269866

Gst
0.7086

17073

DUF1295 superfamily
0.6985

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GST_C_Omega_like C-terminal, alpha helical domain of Class Omega-like Glutathione S-transferases; Glutathione S-... cl02776 210.123 2.04E-66 237 - 378 specific 198299
GST_C_family superfamily C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione S-transferase... - 210.123 2.04E-66 237 - 378 superfamily 261442
ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] - 383.992 1.33E-131 85 - 393 multi-dom 223512

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_33342 PHATR_33342 197545 187342 Not available Cre12.g538100.t1.2 AT4G19880.1 344519

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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