25295 GstThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25295	chr_17	Gst	486672	491128	-	Gst

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442144	Thaps25295.1, Thaps25295.5, Thaps25295.3, Thaps25295.10, Thaps25295.2, Thaps25295.6, Thaps25295.9, Thaps25295.8, Thaps25295.4, Thaps25295.7

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0201

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0013	0.47	0.036 65

Most Highly Correlated Transcripts

bd1155 (bd1155) GCS superfamily 0.8961	21785 Pyr_redox_2 0.863	5180 hypothetical protein 0.8563	269866 Gst 0.8317	36037 Trypsin_2 0.7835	2399 Str_synth superfamily 0.7829
36641 Aldolase_Class_I superfamily 0.759	261278 GRX_GRXh_1_2_like 0.7565	31885 S_TKc 0.7528	25012 hypothetical protein 0.7496

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GST_N_family		Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic...	cl00388	65.6708	8.32E-13	810 - 883	specific	238319
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	65.6708	8.32E-13	810 - 883	superfamily	260398
Gst		Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	-	105.662	2.75E-25	810 - 1010	multi-dom	223698

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006508 GO:0008237 GO:0008270 -

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